Index
Introducing OpenCOR, PMR, and CellML
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Background to the VPH-Physiome project
Install and launch OpenCOR
Create and run a simple CellML model: editing and simulation
Open an existing CellML file from a local directory or the Physiome Model Repository
A simple first order ODE
The Lorenz attractor
A model of ion channel gating and current: Introducing CellML units
A model of the potassium channel: Introducing CellML components and connections
A model of the sodium channel: Introducing CellML encapsulation and interfaces
A model of the nerve action potential: Introducing CellML imports
A model of the cardiac action potential: Importing units and parameters
Code generation
Model annotation
The Physiome Model Repository and the link to bioinformatics
Using PMR with OpenCOR
SED-ML, functional curation and Web Lab
Using OpenCOR with Python (beta)
Speed comparisons with MATLAB
References
Related Topics
Documentation overview